Having made a similar post myself, I can respond. I would think that you were right in the first place about the batteries - the 140ah ones are house batteries and the smaller the engines start. On my boat there were an additional TWO 44 ah batteries for the TWO VHF radios (yes, ex-charter in Greece). The DC-DC charger fed those VHF batteries. I would guess that the VHF batteries have already been removed from your boat, but it's also possible that the 1212 is feeding the starter battery.
BTW I removed the two VHF batteries and added another 185 ah house battery in it's place, doing away with the DC-Dc charger setup.