Our 2006 B37 cr was recently hauled out, and the keel sandblasted, epoxy coated and painted, after 8 years.
The work to your new boat would presumably be different that the work done to an already launched boat. If the hull keel joint is sound, IMHO there would be no need to disturb this joint, just satisfy yourself that that the proposed methodology to remove any remaining visible sealant, and prepare the affected areas will be appropriate. After all it is a new boat.
Good luck.
Steven
SV Konan the Bavarian